Project Creates Repository for Microarray Datasets

Project creates repository for microarray datasets.

BioGRID: a general repository for interaction datasets

Access to unified datasets of protein and genetic interactions is critical for interrogation of gene/protein function and analysis of global network properties. BioGRID is a freely accessible database of physical and genetic interactions available at http://www.thebiogrid.org. BioGRID release version 2.0 includes >116 000 interactions from Saccharomyces cerevisiae, Caenorhabditis elegans, Droso...

A Bayesian model for microarray datasets merging

The aggregation of microarray datasets originating from different studies is still a difficult open problem. Currently, best results are generally obtained by the so-called meta-analysis approach, which aggregates results from individual datasets, instead of analyzing aggregated datasets. In order to tackle such aggregation problems, it is necessary to correct for interstudy variability prior t...

Class Prediction with Microarray Datasets

Microarray technology is having a significant impact in the biological and medical sciences and class prediction will play an increasingly important role in the use and interpretation of microarray data. For example, classifiers could be constructed indicating the detailed subtype of a disease, its expected progression and the best treatment strategy. In this chapter we outline the main stages ...

NMRb: a web-site repository for raw NMR datasets

UNLABELLED The development of NMR in structural proteomics requires the availability of automatic structure determination methods. Many researchers are commonly confronted with the lack of raw datasets during the validation step of such methods. In order to increase test possibilities, the NMRb web-site offers a database of NMR raw datasets, ordered by spectral characteristics. AVAILABILITY N...